PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678450042
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family TCP
Protein Properties Length: 431aa    MW: 46846.2 Da    PI: 7.1406
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678450042genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP111.21.5e-3434141289
        TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.........ssssa.......seceaesssssasns 85 
                +g+kdrhsk++T++g+RdRRvRl a++a++f+d+qd+LG+d++sk+++WL+++ak+ai+el+++             +       ++c   ++ ++++  
  678450042  34 TGRKDRHSKVCTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKTAIDELAQLppwhpasqtM---NferdelqKKC---EEDQQQQ-- 125
                79**************************************************************7655442220...12211111222...1111111.. PP

        TCP  86 ssg..............k 89 
                  +              +
  678450042 126 --KeeltvhhgkpvipgA 141
                ..1122233333444441 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036344.7E-3334145IPR005333Transcription factor, TCP
PROSITE profilePS5136933.0333694IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 431 aa     Download sequence    Send to blast
MEESSNHRAV LPLSRLGPRS EIVEVQGGHI VRSTGRKDRH SKVCTAKGPR DRRVRLAAHT  60
AIQFYDVQDR LGYDRPSKAV DWLIKKAKTA IDELAQLPPW HPASQTMNFE RDELQKKCEE  120
DQQQQKEELT VHHGKPVIPG ASGKKPMIMV GTEDEVHNNP SSQNSGFLPS SLDSDAIADT  180
IKSFFPMGAS TEASSSSMQY RSFQASDLLS GSSSNSQDLR LSLQSFQDPI LLHHQPSEHS  240
HQQGHSLLGF DGTPNWAEHH QQAVAAAAAA ELSRFQRLTA WNSGGGTSNI GNGGAAPGFL  300
FNSQQPALQQ LSGHTHFSSQ RGPLQSSNSP SIRAWMDASG VAASVSSSDH SQHQQLHHQL  360
LPSYIPMYPS SMQGNGFASG AAVVRLIRFL PLSDTHLTLP SSVKEGLLLL EIGSSMSAAR  420
IIQIPTSVED T
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011082738.11e-160PREDICTED: transcription factor TCP4-like
RefseqXP_011082737.11e-160PREDICTED: transcription factor TCP4-like
SwissprotQ8LPR54e-83TCP4_ARATH; Transcription factor TCP4
TrEMBLA0A0M4MCU81e-132A0A0M4MCU8_9LAMI; TCP transcription factor CIN2A
STRINGPGSC0003DMT4000397861e-108(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA32072349
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.32e-65TCP family protein